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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20201589_20202429_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20201589 - 20202429

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTGTA

5'SS Class:

major

3'SS Sequence:

AACTTCCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTTTTTTAATC

Flanking Amino Acid:

PVPTAEAVLQVGQNGFTYKM

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

1.3

74.1

36.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.7

0.38

0.9

63.8

37.4

Minor 5ss

37.8

-1.4

3.1

49.5

46.8

Minor BPS

75.4

0.78

1.1

33.7

Associated Gene:

Gene:

VPS37A

Ensembl Gene ID:

ENSAPLG00000010973

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011442

20196908 - 20208482

11575