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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20287680_20296157_F

Intron Information:

Intron Rank:

146952

Intron Class:

major

Intron Phase:

Intron Coordinates:

20287680 - 20296157

Intron Length:

8478

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCAAATCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TCTTCTCCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

68.5

0.42

57.8

42.6

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

49.9

0.08

74.23

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024919

20281409 - 20307411

26003

ENSAPLT00000017824

20281409 - 20301573

20165