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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20299835_20321986_F

Intron Information:

Intron Rank:

146957

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20299835 - 20321986

Intron Length:

22152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATCA

5'SS Class:

strong_major

3'SS Sequence:

AATGGTAAATAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGCTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

73.8

30.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

46.9

-0.1

1.2

44.6

44.3

Minor 5ss

37.6

-1.4

3.1

48.6

47.1

Minor BPS

63.6

0.29

1.3

63.75

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029146

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020900

20296014 - 20322188

26175