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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20393286_20398814_R

Intron Information:

Intron Rank:

153698

Intron Class:

major

Intron Phase:

Intron Coordinates:

20393286 - 20398814

Intron Length:

5529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCGCTTTCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

74.6

0.55

0.8

73.3

31.6

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

50.8

0.1

1.5

64.5

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048522

20392713 - 20398906

6194

ENSAPLT00000034359

20387433 - 20398906

11474