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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20540580_20540842_F

Intron Information:

Intron Rank:

130094

Intron Class:

major

Intron Phase:

Intron Coordinates:

20540580 - 20540842

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAGGAA

5'SS Class:

major

3'SS Sequence:

TTTCTAATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CCATTTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

62.8

37.6

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.1

0.77

0.8

78.5

33.5

Minor 5ss

26.8

-2.7

3.7

37.2

47.4

Minor BPS

50.2

0.08

1.7

64.16

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031682

20540083 - 20557265

17183