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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20540942_20556298_F

Intron Information:

Intron Rank:

130095

Intron Class:

major

Intron Phase:

Intron Coordinates:

20540942 - 20556298

Intron Length:

15357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TACAACTAAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

1.1

82.6

29.9

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

80.4

0.68

0.8

78.7

30.2

Minor 5ss

32.4

-2

2.5

40.2

Minor BPS

45.9

-0.3

1.9

55.78

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031682

20540083 - 20557265

17183