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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20636478_20640307_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20636478 - 20640307

Intron Length:

3830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTATGCATT

5'SS Class:

weak_major

3'SS Sequence:

TGTCATGTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

AAAATGATAACA

Flanking Amino Acid:

VMRLLSHLKIVEEALEAVKN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

69.2

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

70.9

0.47

44.1

Minor 5ss

63.9

0.47

2.4

80.7

33.1

Minor BPS

43.2

-0.5

2.2

53.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003125

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003163

20636310 - 20654859

18550