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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20875057_20888930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

20875057 - 20888930

Intron Length:

13874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCCTTTTATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

85.9

25.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

83.7

0.76

0.8

79.1

32.9

Minor 5ss

41.9

-0.9

2.9

58.4

46.2

Minor BPS

67.9

0.65

1.6

85.32

34.8

Associated Gene:

Gene:

CTNNA2

Ensembl Gene ID:

ENSAPLG00000002947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026967

20868377 - 20891408

23032

ENSAPLT00000003009

20874513 - 20988288

113776

ENSAPLT00000003007

20874976 - 20988288

113313