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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20928261_20940572_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20928261 - 20940572

Intron Length:

12312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTAATCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTGTTTAATC

Flanking Amino Acid:

LEATKLLSETVMPRFAEQVE

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

85.9

25.4

Major BPS

87.6

0.93

0.9

89.3

Major PPT

74.1

0.54

67.8

42.7

Minor 5ss

43.9

-0.7

2.8

43.6

Minor BPS

71.7

0.66

1.7

81.67

33.1

Associated Gene:

Gene:

CTNNA2

Ensembl Gene ID:

ENSAPLG00000002947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003009

20874513 - 20988288

113776

ENSAPLT00000003007

20874976 - 20988288

113313