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Intron Name: Anas_platyrhynchos_platyrhynchos_4_20949760_20953219_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20949760 - 20953219

Intron Length:

3460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTTTTCATG

Flanking Amino Acid:

DQLIAGQSARAIMAQLPQEE

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

83.2

30.8

Major BPS

100

1.24

0.5

100

Major PPT

87.5

0.84

0.7

81.1

30.9

Minor 5ss

33.4

-1.9

2.8

41.5

Minor BPS

53.5

-0

1.8

61.64

41.7

Associated Gene:

Gene:

CTNNA2

Ensembl Gene ID:

ENSAPLG00000002947

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003009

20874513 - 20988288

113776

ENSAPLT00000003007

20874976 - 20988288

113313