Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_21051583_21056267_F

Intron Information:

Intron Rank:

140576

Intron Class:

major

Intron Phase:

Intron Coordinates:

21051583 - 21056267

Intron Length:

4685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCAGAGTT

5'SS Class:

major

3'SS Sequence:

TCTAATTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AGATTTCTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.3

69.9

41.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

78.3

0.64

0.9

72.5

37.3

Minor 5ss

31.3

-2.1

3.5

45.5

Minor BPS

53.1

0.17

1.6

68.24

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021400

21040542 - 21056313

15772