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Intron Name: Anas_platyrhynchos_platyrhynchos_4_21880015_22051678_R

Intron Information:

Intron Rank:

134535

Intron Class:

major

Intron Phase:

Intron Coordinates:

21880015 - 22051678

Intron Length:

171664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTCTTTTCAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.8

78.8

35.5

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

76.4

0.6

75.4

38.6

Minor 5ss

35.5

-1.6

2.8

45.4

42.6

Minor BPS

46.3

-0.4

1.9

54.19

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019689

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019777

21879428 - 22051768

172341