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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22352577_22353886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22352577 - 22353886

Intron Length:

1310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CGGTGCTGACAG

Flanking Amino Acid:

AELRMAVSKAGPVVTDNGNF

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

66.3

0.4

1.1

41.8

Major PPT

78.1

0.63

0.9

69.3

41.7

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

38.3

-1

2.1

37.83

44.5

Associated Gene:

Gene:

RPIA

Ensembl Gene ID:

ENSAPLG00000015356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024930

22350273 - 22363822

13550

ENSAPLT00000016023

22350273 - 22363640

13368