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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22354620_22354726_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22354620 - 22354726

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCTT

5'SS Class:

major

3'SS Sequence:

CATTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

DSNLNLIKGGGGCLTQEKIV

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

68.8

43.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.3

0.68

0.8

73.6

Minor 5ss

37.9

-1.4

3.3

48.3

47.3

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

RPIA

Ensembl Gene ID:

ENSAPLG00000015356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016023

22350273 - 22363640

13368

ENSAPLT00000024930

22350273 - 22363822

13550