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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22355265_22358084_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22355265 - 22358084

Intron Length:

2820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAC

U12 Branch Point Sequence:

CCCCTGATAACT

Flanking Amino Acid:

AIVCIPTSFQARQLILQNGL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

35.5

Major BPS

62.7

0.32

1.2

39.8

Major PPT

69.7

0.44

63.8

41.7

Minor 5ss

-1.2

3.4

56.7

47.6

Minor BPS

42.8

-0.4

2.2

57.09

45.7

Associated Gene:

Gene:

RPIA

Ensembl Gene ID:

ENSAPLG00000015356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016023

22350273 - 22363640

13368

ENSAPLT00000024930

22350273 - 22363822

13550