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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22362119_22363394_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22362119 - 22363394

Intron Length:

1276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

GTGTTTTTACCC

Flanking Amino Acid:

QPARRWTGTSRCESRTHGTS

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

64.9

0.34

1.1

61.5

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

58.4

0.24

1.6

65.93

40.3

Associated Gene:

Gene:

RPIA

Ensembl Gene ID:

ENSAPLG00000015356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024930

22350273 - 22363822

13550