Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_22370516_22375588_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22370516 - 22375588

Intron Length:

5073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCTGA

5'SS Class:

major

3'SS Sequence:

TTTCCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TTACTGTGAATG

Flanking Amino Acid:

GSGGEARSGGRSLVIISTLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

41.3

Major BPS

69.2

0.48

37.1

Major PPT

86.8

0.83

0.7

81.2

23.8

Minor 5ss

36.4

-1.5

3.2

46.6

48.7

Minor BPS

45.4

-0.4

2.1

54.16

Associated Gene:

Gene:

EIF2AK3

Ensembl Gene ID:

ENSAPLG00000015496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016182

22370110 - 22410834

40725