Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_22395476_22395992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22395476 - 22395992

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

CTTCTGTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCAGCTCAAAG

Flanking Amino Acid:

LPKIKWKPLIHSPSRTPVLV

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.3

72.7

38.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

69.6

0.44

0.9

68.7

37.2

Minor 5ss

37.9

-1.4

2.8

50.4

39.3

Minor BPS

45.4

-0.4

2.1

53.71

46.6

Associated Gene:

Gene:

EIF2AK3

Ensembl Gene ID:

ENSAPLG00000015496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016182

22370110 - 22410834

40725