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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22548166_22549030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22548166 - 22549030

Intron Length:

865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGGGA

5'SS Class:

major

3'SS Sequence:

CTTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

VPTGGGGNITAGCIAQKMGL

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

62.5

37.9

Major BPS

100

1.24

0.5

100

Major PPT

83.6

0.76

0.9

85.6

26.3

Minor 5ss

22.5

-3.2

3.3

43.5

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

THNSL2

Ensembl Gene ID:

ENSAPLG00000000600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024956

22544494 - 22553005

8512

ENSAPLT00000000714

22544494 - 22551324

6831