Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_22560672_22561417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22560672 - 22561417

Intron Length:

746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTCCTCCTAATG

Flanking Amino Acid:

ENFEPFMKALGLPDDQIQKG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

78.3

0.64

0.9

73.2

37.1

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

48.4

-0.2

1.8

52.59

42.7

Associated Gene:

Gene:

FABP1

Ensembl Gene ID:

ENSAPLG00000001196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001213

22560605 - 22563798

3194