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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22563293_22563747_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22563293 - 22563747

Intron Length:
455

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTGAGTGCA

5'SS Class:
major

3'SS Sequence:
CATTATTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCCAT

U12 Branch Point Sequence:
TTTCCATTATTT

Flanking Amino Acid:
TELNGDTITHTMTMGDLTMK

Intron Amino Acid Position:
112

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.5
0.58
1.3
71.1
34.7

Major BPS
77.3
0.68
1.2
86.7
32.3

Major PPT
83.8
0.76
0.8
80.8
36.1

Minor 5ss
28.9
-2.4
3
31.7
35.3

Minor BPS
60.7
0.41
1.9
82.89
38.1

Associated Gene:

Gene:
FABP1

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22560605 - 22563798
3194