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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22565673_22566845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22565673 - 22566845

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CTTGCTTTGAGA

Flanking Amino Acid:

PSHPITKDLEVMRVQTEMEL

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

76.5

0.6

0.9

73.9

36.8

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

54.1

0.12

1.8

65.32

Associated Gene:

Gene:

SMYD1

Ensembl Gene ID:

ENSAPLG00000002116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022063

22565514 - 22587379

21866

ENSAPLT00000002330

22565514 - 22587379

21866