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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22568578_22571100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22568578 - 22571100

Intron Length:

2523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCCC

5'SS Class:

major

3'SS Sequence:

ATTTTGTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTCCTCACCA

Flanking Amino Acid:

MLAVKEGENKPSAETVKEVI

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

63.1

41.4

Major BPS

81.9

0.79

0.9

80.1

Major PPT

78.3

0.64

0.9

40.8

Minor 5ss

38.1

-1.3

3.2

51.2

45.5

Minor BPS

69.1

0.6

1.8

83.78

36.8

Associated Gene:

Gene:

SMYD1

Ensembl Gene ID:

ENSAPLG00000002116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022063

22565514 - 22587379

21866

ENSAPLT00000002330

22565514 - 22587379

21866