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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22574046_22575661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22574046 - 22575661

Intron Length:

1616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAA

U12 Branch Point Sequence:

CCCGTGTAAACT

Flanking Amino Acid:

PNCTVIFNNGNHEAVRSMFH

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

40.1

Major BPS

57.5

0.19

1.4

61.7

43.1

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

28.4

-2.5

3.1

31.4

36.6

Minor BPS

41.3

-0.5

2.3

53.66

48.4

Associated Gene:

Gene:

SMYD1

Ensembl Gene ID:

ENSAPLG00000002116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002330

22565514 - 22587379

21866