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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22670081_22672441_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22670081 - 22672441

Intron Length:

2361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTATCTTAATA

Flanking Amino Acid:

GLSVESPLSVSFSAGCVALP

Intron Amino Acid Position:

285

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

88.5

0.87

0.6

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

74.3

0.76

1.2

78.16

31.9

Associated Gene:

Gene:

RMND5A

Ensembl Gene ID:

ENSAPLG00000002419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002473

22665758 - 22693034

27277