Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_22722654_22723837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22722654 - 22723837

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

GAGGCCATCACG

Flanking Amino Acid:

MRELSKEMMKAGIIEEMLED

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

77.2

0.61

73.7

36.9

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

43.3

-0.6

2.1

46.15

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001096

22717458 - 22725050

7593