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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22795052_22797766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22795052 - 22797766

Intron Length:

2715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TGTTACTGAAAG

Flanking Amino Acid:

AVKSKDIKEYVKWMMYWIIF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

85.1

25.6

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

75.6

0.58

69.5

41.7

Minor 5ss

34.4

-1.8

2.9

46.9

41.8

Minor BPS

54.1

-0

1.8

64.15

42.6

Associated Gene:

Gene:

REEP1

Ensembl Gene ID:

ENSAPLG00000004849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048151

22773839 - 22825724

51886

ENSAPLT00000022852

22773839 - 22825724

51886

ENSAPLT00000005007

22773839 - 22825724

51886