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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22801511_22806845_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22801511 - 22806845

Intron Length:

5335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAC

U12 Branch Point Sequence:

GTTGCCACACTT

Flanking Amino Acid:

ATAAVMAASKVSQLLHLPTD

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

Major BPS

52.3

0.06

1.4

64.2

Major PPT

74.7

0.56

0.9

69.8

36.6

Minor 5ss

28.9

-2.4

3.3

37.9

46.9

Minor BPS

44.4

-0.3

2.1

65.83

44.8

Associated Gene:

Gene:

REEP1

Ensembl Gene ID:

ENSAPLG00000004849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022852

22773839 - 22825724

51886

ENSAPLT00000005007

22773839 - 22825724

51886