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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22824189_22824268_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22824189 - 22824268

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

GATAACCACGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TCTGCCTTAACG

Flanking Amino Acid:

KSTSSSATETMKQQRDGCAQ

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

73.2

30.8

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

52.3

0.05

44.6

37.2

Minor 5ss

-2.3

3.1

37.1

40.4

Minor BPS

76.2

0.68

1.5

43.3

Associated Gene:

Gene:

REEP1

Ensembl Gene ID:

ENSAPLG00000004849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005007

22773839 - 22825724

51886