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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22836666_22838211_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22836666 - 22838211

Intron Length:

1546

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCTCTGGC

5'SS Class:

weak_major

3'SS Sequence:

CCTCTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGCCCGCTGACT

Flanking Amino Acid:

SSLCKRCGIVSCRCGRAALR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.1

1.3

55.9

42.7

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

29.9

-2.3

41.1

40.4

Minor BPS

45.3

-0.2

2.3

66.49

43.9

Associated Gene:

Gene:

IMMT

Ensembl Gene ID:

ENSAPLG00000005014

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008549

22836534 - 22851638

15105