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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22853907_22854978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22853907 - 22854978

Intron Length:

1072

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAG

U12 Branch Point Sequence:

GGCCCCACAATC

Flanking Amino Acid:

ERFQQANRIPTDRVMDEFLN

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

77.5

32.8

Major BPS

47.7

-0.1

1.5

55.4

40.3

Major PPT

93.2

0.97

0.6

88.8

20.4

Minor 5ss

32.2

-2

3.3

39.2

39.9

Minor BPS

45.2

-0.3

1.8

51.09

39.3

Associated Gene:

Gene:

PTCD3

Ensembl Gene ID:

ENSAPLG00000005086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025279

22852736 - 22869588

16853

ENSAPLT00000005307

22853346 - 22870256

16911

ENSAPLT00000048200

22853346 - 22869782

16437

ENSAPLT00000027135

22852736 - 22870880

18145