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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22860163_22861180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22860163 - 22861180

Intron Length:

1018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAA

U12 Branch Point Sequence:

GTAACCTCAATG

Flanking Amino Acid:

VLKEMEALKIEPSLATYEHL

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

64.3

0.36

65.6

31.9

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

55.2

0.02

1.7

58.63

42.7

Associated Gene:

Gene:

PTCD3

Ensembl Gene ID:

ENSAPLG00000005086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048200

22853346 - 22869782

16437

ENSAPLT00000027135

22852736 - 22870880

18145

ENSAPLT00000025279

22852736 - 22869588

16853

ENSAPLT00000005307

22853346 - 22870256

16911