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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22861326_22861987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22861326 - 22861987

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

TTGTGTGTATTT

Flanking Amino Acid:

RSPERWELVKIFLNHMVQQE

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

83.2

0.75

0.9

77.1

37.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

43.3

-0.4

2.4

66.59

45.3

Associated Gene:

Gene:

PTCD3

Ensembl Gene ID:

ENSAPLG00000005086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005307

22853346 - 22870256

16911

ENSAPLT00000048200

22853346 - 22869782

16437

ENSAPLT00000027135

22852736 - 22870880

18145

ENSAPLT00000025279

22852736 - 22869588

16853