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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22878012_22878214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22878012 - 22878214

Intron Length:

203

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTCAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TAGTCATTAACT

Flanking Amino Acid:

MTEKYPGIRQLLEKKEGLFR

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

76.3

0.59

78.1

34.2

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

74.8

0.86

1.6

86.8

38.4

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971