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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22886148_22886469_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22886148 - 22886469

Intron Length:

322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGCATC

5'SS Class:

major

3'SS Sequence:

TCCAACTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAA

U12 Branch Point Sequence:

TTCCCCTCACCG

Flanking Amino Acid:

VNNYNNEVNKVCMPLGLHRS

Intron Amino Acid Position:

1028

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

68.3

42.9

Major BPS

59.3

0.23

1.2

70.5

35.7

Major PPT

69.5

0.44

0.8

35.4

Minor 5ss

38.9

-1.2

3.1

51.9

Minor BPS

50.4

-0.1

61.08

46.4

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971