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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22886569_22887449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22886569 - 22887449

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGACA

5'SS Class:

strong_major

3'SS Sequence:

TGTCCACATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTCCTGTCCACA

Flanking Amino Acid:

AKGSTVNTVQISCLLGQIEL

Intron Amino Acid Position:

1061

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

74.2

35.8

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

70.2

0.45

63.3

37.5

Minor 5ss

32.6

-2

3.1

41.2

44.8

Minor BPS

40.7

-0.7

2.4

56.1

43.3

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971