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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22887879_22888471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22887879 - 22888471

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGAGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTTTGAGA

Flanking Amino Acid:

VKTSRSGYLQRCIIKHLEGL

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

69.9

41.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.8

0.38

1.1

65.2

40.4

Minor 5ss

29.8

-2.3

3.3

38.5

46.6

Minor BPS

71.8

0.68

1.6

81.99

33.2

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971