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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22888638_22889141_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22888638 - 22889141

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGCAT

5'SS Class:

major

3'SS Sequence:

AACTTTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATAAAGG

Flanking Amino Acid:

QFPFIAENYEVIQKANHLDE

Intron Amino Acid Position:

1195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

62.9

43.2

Major BPS

80.4

0.76

80.3

31.8

Major PPT

75.7

0.58

0.8

70.3

35.4

Minor 5ss

30.4

-2.2

3.7

46.2

49.1

Minor BPS

-0.4

2.2

54.7

45.8

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971