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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22892778_22893526_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22892778 - 22893526

Intron Length:

749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCAC

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

TTCACCAAAGGA

Flanking Amino Acid:

KQLTRVSLAEVLQKVELEES

Intron Amino Acid Position:

1442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

68.4

38.7

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

75.7

0.58

0.9

70.1

36.5

Minor 5ss

32.7

-2

45.6

Minor BPS

39.4

-0.8

2.2

52.69

45.2

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971