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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22894615_22895259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22894615 - 22895259

Intron Length:

645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

TATGGATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CTGTTATGGATT

Flanking Amino Acid:

RKDLDGDGDKAQNSQEAPEE

Intron Amino Acid Position:

1533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

69.1

0.43

59.3

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

-0.1

1.7

63.79

41.1

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971