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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22895374_22896224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22895374 - 22896224

Intron Length:

851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGATT

5'SS Class:

strong_major

3'SS Sequence:

ATTGTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATGTAATTACAT

Flanking Amino Acid:

AKRRKNQEEEVDYESEEENA

Intron Amino Acid Position:

1571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

84.4

Major BPS

73.9

0.59

30.2

Major PPT

83.2

0.75

0.8

81.7

35.4

Minor 5ss

38.3

-1.3

3.4

57.5

46.8

Minor BPS

45.6

-0.2

2.1

66.1

43.8

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971