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Intron Name: Anas_platyrhynchos_platyrhynchos_4_22897117_22897869_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22897117 - 22897869

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

GCTAATTTATAT

Flanking Amino Acid:

NLAELFRYSDILDLNRLYSN

Intron Amino Acid Position:

1733

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

76.5

38.6

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

-0.4

2.6

64.1

40.5

Minor BPS

45.1

-0.2

1.8

59.68

43.3

Associated Gene:

Gene:

POLR1A

Ensembl Gene ID:

ENSAPLG00000013871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014548

22870646 - 22902616

31971