Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_23066549_23067635_F

Intron Information:

Intron Rank:

142727

Intron Class:

major

Intron Phase:

Intron Coordinates:

23066549 - 23067635

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

TTTCTCCCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAT

U12 Branch Point Sequence:

TTTCTCCCAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

30.4

Major BPS

75.9

0.64

1.1

77.7

35.2

Major PPT

78.7

0.65

0.8

74.5

29.3

Minor 5ss

42.1

-0.9

2.8

43.6

Minor BPS

54.9

0.15

1.9

73.95

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038086

23066452 - 23074162

7711