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Intron Name: Anas_platyrhynchos_platyrhynchos_4_23378273_23398251_R

Intron Information:

Intron Rank:

154259

Intron Class:

major

Intron Phase:

Intron Coordinates:

23378273 - 23398251

Intron Length:

19979

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TATGTCTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

88.3

0.86

0.7

80.8

36.2

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

63.3

0.49

1.8

80.35

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041587

23377765 - 23404340

26576