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Intron Name: Anas_platyrhynchos_platyrhynchos_4_23880336_23881013_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23880336 - 23881013

Intron Length:

678

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCATGTACT

5'SS Class:

major

3'SS Sequence:

GTGTTATAAAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTGCTGTTAAAT

Flanking Amino Acid:

LSAIKTPYPLMTGVQKNPDC

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.3

80.2

34.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

-0.1

1.8

51.9

45.4

Minor 5ss

36.6

-1.5

3.9

56.5

Minor BPS

51.3

0.12

2.1

74.17

42.5

Associated Gene:

Gene:

MAEA

Ensembl Gene ID:

ENSAPLG00000015852

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016552

23832468 - 23881707

49240