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Intron Name: Anas_platyrhynchos_platyrhynchos_4_23903296_23904546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23903296 - 23904546

Intron Length:

1251

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTGC

5'SS Class:

major

3'SS Sequence:

TGTCTCTTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CATTGTTTAACA

Flanking Amino Acid:

KAKRAEKEMAEMSQEIAETL

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

67.2

39.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.3

0.61

0.8

72.5

32.3

Minor 5ss

36.4

-1.5

3.4

50.2

46.4

Minor BPS

64.2

0.44

1.8

71.96

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043979

23898409 - 23949564

51156

ENSAPLT00000016585

23885533 - 23949564

64032