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Intron Name: Anas_platyrhynchos_platyrhynchos_4_23939245_23940091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23939245 - 23940091

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

TTTCTTTGTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

AGTTTTGAGATT

Flanking Amino Acid:

SLCERQDRIKCPFHGKIIPR

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

40.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

87.3

0.84

0.8

84.2

30.7

Minor 5ss

33.8

-1.8

3.1

43.2

44.2

Minor BPS

42.2

-0.5

2.1

60.24

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043979

23898409 - 23949564

51156

ENSAPLT00000016585

23885533 - 23949564

64032