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Intron Name: Anas_platyrhynchos_platyrhynchos_4_23940204_23945142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23940204 - 23945142

Intron Length:

4939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTGTC

5'SS Class:

major

3'SS Sequence:

TTCTTTTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAA

U12 Branch Point Sequence:

TTTCTTTTAAAC

Flanking Amino Acid:

MRFEKQAAQPEWRDPEFMRE

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.1

73.5

35.7

Major BPS

74.9

0.62

67.3

39.2

Major PPT

79.5

0.66

0.9

77.4

34.7

Minor 5ss

39.7

-1.2

3.1

52.8

44.4

Minor BPS

68.8

0.57

1.3

76.65

32.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043979

23898409 - 23949564

51156

ENSAPLT00000016585

23885533 - 23949564

64032