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Intron Name: Anas_platyrhynchos_platyrhynchos_4_23945327_23949437_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23945327 - 23949437

Intron Length:

4111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATACTTTATTT

Flanking Amino Acid:

RSRLEKKVLNKGAVKRVVKA

Intron Amino Acid Position:

701

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

80.5

27.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.1

0.86

0.7

85.6

28.2

Minor 5ss

41.3

-1

3.1

56.6

Minor BPS

62.5

0.47

1.6

77.73

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015894

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043979

23898409 - 23949564

51156

ENSAPLT00000016585

23885533 - 23949564

64032