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Intron Name: Anas_platyrhynchos_platyrhynchos_4_24160675_24176403_R

Intron Information:

Intron Rank:

143401

Intron Class:

major

Intron Phase:

Intron Coordinates:

24160675 - 24176403

Intron Length:

15729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTGTAT

U12 Branch Point Sequence:

GTTGTTGTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

74.4

Major BPS

53.8

0.09

1.6

57.4

49.1

Major PPT

84.1

0.77

0.8

81.2

36.4

Minor 5ss

41.4

-1

2.8

50.4

39.9

Minor BPS

45.1

-0.2

2.2

67.28

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048430

24159436 - 24176641

17206